SubtiBank SubtiBank
ykuO [2017-11-16 15:32:01]
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ykuO [2017-11-16 15:32:01]

unknown
Locus
BSU14160
Isoelectric point
8.13
Molecular weight
33.46 kDa
Protein length
297 aa Sequence Blast
Gene length
891 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Groups of genes → Proteins of unknown function

    • Gene

    Coordinates
    1,487,504 → 1,488,397

    Expression and Regulation

    Operons

    Genes
    ykuN-ykuO-ykuP
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • SigI: sigma factor, PubMed, in SigI regulon

    • Regulatory mechanism

  • ResD: activation, PubMed, in ResD regulon
  • Kre: repression, in Kre regulon
  • NsrR: repression, PubMed, in NsrR regulon
  • Fur: repression, PubMed, in Fur regulon

    • Regulation

  • expressed under anaerobic conditions (ResD) PubMed
  • induced by iron starvation (second wave) (Fur) PubMed
  • expression of the operon is strongly induced at the beginning of biofilm formation PubMed

    • Additional information

  • the YkuN-YkuO-YkuP operon is strongly unregulated in a kre mutant PubMed
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    Biological materials

    Mutant

  • MGNA-B338 (ykuO::erm), available at the NBRP B. subtilis, Japan
  • BKE14160 (ΔykuO::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CGATGCCGTAACAGCGGTTG, downstream forward: _UP4_ATTCATTAGAGGAGGAACAA
  • BKK14160 (ΔykuO::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CGATGCCGTAACAGCGGTTG, downstream forward: _UP4_ATTCATTAGAGGAGGAACAA

    • References

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